There’s something about cool evenings and the smell of roasted squash that brings it all back grandma’s tiny kitchen, a cracked Pyrex dish, and so much laughter. This Spaghetti Squash Au Gratin recipe is everywhere lately, from Pinterest boards to late-night scrolls. Probably because it tastes like childhood comfort but looks like a dinner party showstopper.
This one’s pure cozy. Roasted spaghetti squash tossed with buttery onions, melty cheese, and a creamy swipe of yogurt or sour cream. It’s the kind of easy recipe that sneaks in veggies without trying too hard. A little like mashed potatoes’ lighter cousin. Full details in the blog!
First time I made this, I forgot the cheese. Twice. But my mom still asked for seconds, so I knew we were onto something. We’ve tested it family-style and fancy both work. I even tried a hint of garlic powder. I tested it. You’ll love the secret!
Why You’ll Love Spaghetti Squash Au Gratin
This recipe is one of those rare gems that’s both indulgent and on the healthier side. It’s cozy comfort food with a modern twist! Here’s why it shines:
- Veggie-packed: It’s a sneaky, delicious way to incorporate squash into your meal.
- Cheesy and satisfying: A velvety Gruyere, cheddar, and Parmesan combo makes it irresistible.
- Low-carb and family-friendly: Perfect for anyone craving better-for-you comfort food.
- Make-ahead friendly: This dish reheats beautifully for busy weeknights.
Ingredients Breakdown
Here’s what you’ll need to bring this cheesy, golden masterpiece to life:

| Ingredient | Amount | Any Substitutions? |
|---|---|---|
| Spaghetti squash | 1 large (about 3–4 lbs) | Nope, spaghetti squash is a must! |
| Unsalted butter | 4 tbsp, divided | Salted butter worksjust adjust added salt. |
| Yellow onion | 1 medium, finely chopped | Try a sweet onion for a milder flavor. |
| Garlic | 2 cloves, minced | 1/2 tsp garlic powder works in a pinch. |
| Gruyere cheese | 1 cup, grated, divided | Swiss cheese is a good alternative. |
| Sharp Cheddar cheese | 1 cup, grated, divided | Any sharp cheese will shine here. |
| Parmesan cheese | 1/2 cup, grated, divided | Pecorino Romano can swap in nicely. |
| Panko breadcrumbs | 1/4 cup | Crushed crackers or regular breadcrumbs work. |
| Whole milk | 3 cups | 2% milk will work, but skip skim milk. |
| All-purpose flour | 4 tbsp | Gluten-free flour blends are fine. |
| Nutmeg | 1/4 tsp | A pinch of cinnamon could work in a pinch. |
Step-by-Step: How to Make Spaghetti Squash Au Gratin
This spaghetti squash au gratin recipe is easier than its fancy name sounds. Let’s break it down step-by-step:
- Roast the spaghetti squash: Preheat the oven to 400°F. Halve the squash lengthwise, scoop out the seeds, and place face-down on a baking sheet. Roast for about 40–50 minutes, or until fork-tender. Let it cool, then scrape the strands with a fork.
- Make the sauce: In a skillet, melt 3 tbsp of butter over medium heat. Sauté the onions until soft and sweet, then add in the garlic. Sprinkle the flour over the onions and stir until golden. Slowly whisk in the milk, season with the nutmeg, salt, and pepper, and let the mixture thicken to a silky consistency.
- Add the cheese: Remove from heat and stir in half the Gruyere, cheddar, and Parmesan. Save the rest for the topping! Stir until the cheese melts into the sauce.
- Combine and top: Toss the cooked spaghetti squash strands in the creamy cheese sauce. Transfer everything into a baking dish. Sprinkle the remaining cheese on top, along with the panko breadcrumbs.
- Bake: Pop the dish back into the oven at 400°F for 20–25 minutes, or until golden and bubbly. Garnish with parsley if you’d like.
Make It Yours: Tips, Swaps, and Variations
This recipe is forgiving and flexibleperfect for experimenting while staying true to its cheesy roots.
- Try a different cheese blend: Gouda, fontina, or Havarti can add fun twists to the flavor.
- Add protein: Some cooked bacon or shredded rotisserie chicken would make this a meal on its own.
- For a healthier spin: Reduce the butter to 2 tbsp, use almond milk, and skip the breadcrumbs.
| Variation | How to Do It |
|---|---|
| Veggie-packed | Mix in steamed broccoli or spinach before baking. |
| Spicy | Add a dash of cayenne to the cheese sauce. |
| Crunchy topping | Swap panko for crushed potato chips or Ritz crackers. |
Serving and Storing Tips
Once your spaghetti squash au gratin comes out of the oven, you’ll know it’s readyit smells absolutely incredible. Here’s how to make the most of it:
- Serving: Pair it with a simple green salad or some crusty bread for a complete meal. It also works wonderfully as a Thanksgiving side!
- Storing: Let leftovers cool completely, then transfer to an airtight container. It’ll keep in the fridge for up to 4 days.
- Reheating: Warm individual portions in the microwave, or reheat the entire dish in a 350°F oven until bubbly.
| Storage Method | How to Do It | Shelf Life |
|---|---|---|
| Fridge | In an airtight container | 4 days |
| Freezer | Tightly wrapped in foil | 1 month |
Expert Insight: The Appeal of Spaghetti Squash Au Gratin
Spaghetti squash au gratin offers a lighter alternative to traditional gratins without sacrificing creaminess or flavor. The natural stringy texture of the squash holds cheese and seasoning beautifully, making it a nutrient-rich, comforting dish that integrates vegetables seamlessly into indulgent meals.
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How Spaghetti Squash Au Gratin Finally Became a Family Favorite
After more than a few burnt edges and undercooked squash attempts, this Spaghetti Squash Au Gratin recipe finally clicked. It took going back to the basics and embracing the slow bake to get that creamy, cheesy finish my family loves. This version is the sum of all those kitchen lessons and happy accidents.
FAQs ( Spaghetti Squash Dinner Ideas | Healthy Spaghetti Squash Au Gratin )
What is Spaghetti Squash Au Gratin?
Spaghetti Squash Au Gratin is a delicious, healthy twist on the classic cheesy gratin dish using spaghetti squash instead of potatoes or pasta. It features tender strands of spaghetti squash baked with a creamy cheese sauce, making it a light yet comforting option. This recipe fits perfectly within low carb recipes and is fantastic for anyone looking to enjoy cheesy goodness without the extra carbs.
How do you cook spaghetti squash for au gratin?
To prepare spaghetti squash for au gratin, start by cutting it in half and removing the seeds. Roast the halves face down on a baking sheet at 400°F for about 40 minutes or until tender. Let it cool, then scrape out the flesh with a fork to create spaghetti-like strands. These strands are then combined with the cheesy sauce and baked again to create a creamy, golden top.
Can Spaghetti Squash Au Gratin be made gluten free?
Yes, Spaghetti Squash Au Gratin is naturally gluten free when you use gluten-free ingredients for the cheese sauce. Substitute any flour in the sauce with gluten-free alternatives like cornstarch or rice flour. This makes it a perfect fit for those who follow gluten-free diets but still want to enjoy rich, comforting squash recipe ideas.
What are some healthy additions to Spaghetti Squash Au Gratin?
To boost nutrition and flavor, try adding sautéed spinach, mushrooms, or steamed broccoli into your Spaghetti Squash Au Gratin. You can also mix in some lean protein like grilled chicken or turkey bacon. These add-ins complement the creamy, cheesy texture and keep the dish balanced and wholesome among low carb recipes.
Can I make Spaghetti Squash Au Gratin ahead of time?
Absolutely! Spaghetti Squash Au Gratin reheats well and can be prepared a day before serving. Just bake it fully, then cover and refrigerate. When ready to eat, simply warm it in the oven until bubbly and golden again. This makes it a great option for easy weeknight meals or entertaining friends with simple squash recipe ideas.

Wrapping Up Your Spaghetti Squash Au Gratin Adventure
Spaghetti Squash Au Gratin is pure kitchen magiccreamy, cheesy, and surprisingly easy to pull off in about an hour. You’ll love how those tender squash strands soak up the rich, golden sauce. It’s comfort-food charm meets a clever veggie twist, perfect for weeknights or a cozy family table.
Feel free to play around with the cheesesswap in gouda or add a sprinkle of cayenne for a fun upgrade. Leftovers reheat wonderfully, and a tip I picked up? Add a handful of steamed greens right before baking for a sneaky veggie boost. Trust me, this recipe’s got all the cozy bases covered.
So, how did your kitchen fare? Got a favorite tweak or a funny “oops” moment? Share your pics and storiesI’d love to see your spin on this family-friendly classic. Go ahead, make this homemade delight part of your dinner rotationyou’ll wanna make it again and again.
Print
SPAGHETTI SQUASH AU GRATIN
- Total Time: 90 minutes
- Yield: 6–8 servings 1x
- Diet: Vegetarian
Description
Spaghetti Squash Au Gratin is a creamy delightful dish perfect for those seeking healthy spaghetti squash au gratin recipes. This cheesy spaghetti squash au gratin offers a rich cheese sauce baked to golden perfection. It’s a great addition to squash recipe ideas and a satisfying spaghetti squash low carb recipes option.
Ingredients
- 1 large spaghetti squash (about 3–4 pounds)
- 4 tablespoons unsalted butter divided
- 1 medium yellow onion finely chopped
- 2 cloves garlic minced
- 4 tablespoons all-purpose flour
- 3 cups whole milk
- 1/2 teaspoon salt plus more to taste
- 1/4 teaspoon black pepper plus more to taste
- 1/4 teaspoon nutmeg
- 1 cup grated Gruyere cheese divided
- 1 cup grated sharp cheddar cheese divided
- 1/2 cup grated Parmesan cheese divided
- 1/4 cup panko breadcrumbs
- 2 tablespoons chopped fresh parsley for garnish (optional)
Instructions
- Preheat oven to 400°F. Slice spaghetti squash in half lengthwise and scoop out seeds. Brush with 1 tablespoon butter, season with salt and pepper. Place cut side down on baking sheet and roast until tender, about 40 minutes.
- Meanwhile, melt 2 tablespoons butter in a pan over medium heat. Add onion and garlic, sauté until translucent.
- Stir in flour and cook for 1-2 minutes until bubbly. Slowly whisk in milk and cook until sauce thickens. Add salt pepper and nutmeg.
- Remove from heat and stir in half the Gruyere, sharp cheddar, and Parmesan cheeses until melted.
- Scrape spaghetti squash strands into a large bowl. Pour cheese sauce over squash and mix well.
- Butter a baking dish then transfer mixture in. Top with remaining cheeses and panko breadcrumbs. Dot with remaining butter.
- Bake at 375°F until golden and bubbly, about 30 minutes. Garnish with parsley if desired before serving.
Notes
- For an extra crispy topping, broil for 2-3 minutes at the end, watching carefully to prevent burning
- This dish reheats well and can be made ahead of time
- Prep Time: 20 minutes
- Cook Time: 70 minutes
- Category: Dinner
- Method: Baked
- Cuisine: American
Nutrition
- Serving Size: 1 serving
- Calories: 320 kcal
- Sugar: 6g
- Sodium: 450mg
- Fat: 20g
- Saturated Fat: 12g
- Unsaturated Fat: 6g
- Trans Fat: 0g
- Carbohydrates: 22g
- Fiber: 4g
- Protein: 15g
- Cholesterol: 60mg










